Oreilly.-.Reproducible.Bioinformatics.With.Python.How.To.Write.Flexible.Documented.Tested.Python.Code.For.Research.Computing.2021.Retail.EPUB.eBook-BitBook

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Reproducible Bioinformatics with Python - How to Write Flexible, Documented, Tes
                              by Ken Youens-Clark                               
                               (p)O'Reilly Media                                

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                        ▀▄▀                          ▀▄▀
   DATE: 22-06-2021      ▓   SIZE: 6.01 MB            ▓   PAGES: n/a           
   FORMAT: EPUB          ▒   DISKS: 1x50.00MB         ▒   EDITION: n/a          
   LANGUAGE: English     ░   ISBN: 9781098100889      ░   REMOVED: DRM

                              https://is.gd/7JV51Y                              

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  Life scientists today urgently need training in bioinformatics skills. Too
 many bioinformatics programs are poorly written and barely maintained--
 usually by students and postdoc researchers who've never learned basic
 programming skills. This practical guide shows how to exploit the best
 parts of Python for solving problems in biology while also creating
 documented, tested, reproducible software. Ken Youens-Clark, author of Tiny
 Python Projects (Manning), demonstrates how to write effective Python code
 and how to use tests to write and refactor scientific programs. You'll
 learn the latest Python features and tools--such as linters, formatters,
 type checkers, and tests--to write documented and tested programs. Create
 command-line Python programs that document and validate parameters Write
 tests to verify refactor programs and confirm they're correct Address
 bioinformatics ideas using Python data structures (strings, lists, and
 sets) and modules such as Biopython Create reproducible shortcuts and
 workflows using makefiles Parse essential bioinformatics file formats such
 as FASTA, FASTQ, and SwissProt Find patterns of text using regular
 expressions Use higher-order functions in Python like filter() and map()
 
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